Assay name
HS_SPP1_1423954 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for SPP1
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
SPP1
Gene aliases
BSPI;ETA-1;BNSP;OPN
Species
Homo sapiens
Main target
ENST00000237623
Exons numbers
1-3
Ensembl exons ids
ENSE00001835007;ENSE00003680042;ENSE00003652331
Amplicon start
103
Amplicon length
115
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000237623
Protein coding
CCDS3626
NM_000582
Chr.4: 87975667 - 87983426
ENST00000360804
Protein coding
CCDS34027
NM_001040060
Chr.4: 87975714 - 87983127
ENST00000395080
Protein coding
CCDS43250
NM_001040058
Chr.4: 87975714 - 87983411
ENST00000504310
Retained intron
Chr.4: 87975714 - 87978024
ENST00000508002
Retained intron
Chr.4: 87975717 - 87980688
ENST00000508233
Protein coding
NM_001251829
Chr.4: 87975714 - 87982798
ENST00000509334
Processed transcript
Chr.4: 87975714 - 87981761
ENST00000509659
Processed transcript
Chr.4: 87975715 - 87983326
ENST00000513981
Processed transcript
Chr.4: 87975714 - 87981678
ENST00000614857
Protein coding
NM_001251830
Chr.4: 87975650 - 87983410