Assay name
MM_FN1_2178826 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for Fn1
Best transcript assay for ENSMUST00000185408
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENSMUST00000185408
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
Fn1
Species
Mus musculus
Main target
ENSMUST00000185408
Exons numbers
12-13
Ensembl exons ids
ENSMUSE00001320645;ENSMUSE00001323844
Amplicon start
2726
Amplicon length
70
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000055226
Protein coding
CCDS15031
NM_010233
Chr.1: 71585524 - 71653175
ENSMUST00000185408
Retained intron
Chr.1: 71585526 - 71609567
ENSMUST00000186129
Protein coding
CCDS78609
NM_001276410
Chr.1: 71585524 - 71653200
ENSMUST00000187627
Nonsense mediated decay
Chr.1: 71590097 - 71600368
ENSMUST00000187938
Protein coding
CCDS78611
NM_001276409
Chr.1: 71585523 - 71653172
ENSMUST00000188674
Protein coding
CCDS78610
NM_001276412
Chr.1: 71585523 - 71653172
ENSMUST00000188894
Protein coding
CCDS78612
NM_001276408
Chr.1: 71585520 - 71653172
ENSMUST00000189821
Protein coding
CCDS78607
NM_001276413
Chr.1: 71585523 - 71653172
ENSMUST00000190780
Protein coding
CCDS78608
NM_001276411
Chr.1: 71585524 - 71653172