Assay name
MM_SYNGAP1_820837 QuantiNova LNA Probe PCR Assay
Assay specification
Best coverage assay for Syngap1
Assay targets 12 transcripts
Assay spans exon
Assay targets 12 transcripts
Assay spans exon
Gene symbol
Syngap1
Species
Mus musculus
Main target
ENSMUST00000202049
Exons numbers
1-2
Ensembl exons ids
ENSMUSE00001363864;ENSMUSE00000518785
Amplicon start
20
Amplicon length
108
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000081285
Protein coding
Chr.17: 26952138 - 26970933
ENSMUST00000177932
Protein coding
Chr.17: 26941452 - 26970541
ENSMUST00000193200
Nonsense mediated decay
Chr.17: 26941499 - 26971121
ENSMUST00000194598
Protein coding
CCDS59625
NM_001281491
Chr.17: 26941253 - 26972434
ENSMUST00000201186
Nonsense mediated decay
Chr.17: 26962306 - 26970562
ENSMUST00000201349
Protein coding
Chr.17: 26941453 - 26970668
ENSMUST00000201702
Protein coding
Chr.17: 26941442 - 26970581
ENSMUST00000202049
Nonsense mediated decay
Chr.17: 26963012 - 26970591
ENSMUST00000202208
Nonsense mediated decay
Chr.17: 26963026 - 26970587
ENSMUST00000228963
Protein coding
Chr.17: 26952319 - 26970933
ENSMUST00000229490
Protein coding
Chr.17: 26941382 - 26970601
ENSMUST00000231853
Protein coding
Chr.17: 26952886 - 26971121