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GeneGlobe ID: JHS-005Z | Cat. No.: | QIAseq RNA Fusion XP Panels

RNA Fusion XP Sarcoma Panel

Kit containing ALL reagents (except indexes) for fusion and gene expression profiling by digital RNAseq

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Product Specification

Target List

Alveolar Soft Part Sarcomas
ASPSCR1TFE3APCKMT2DPTEN
Angiosarcomas & Epitheliod Haemangioendotheliomas
CAMTA1CEP85LCICLEUTXROS1TFE3YAP1AKT1ALKAPCARARID1AARID2ASXL1ATMBRAFCDKN2A (P16INK4A)CICCREBBP (CBP)CTNNB1EGFR (ERBB1)ERBB2 (HER-2, NEU)ERBB3EZH2FBXW7FGFR1FGFR2FGFR3FGFR4FLT3HRASJAK3KMT2DKRASMED12METMLH1MPLNCOR1NOTCH2NRASPAX5PBRM1PIK3CA (p110-alpha)PIK3CBPIK3R1 (p85-ALPHA)PLCG1PTENTERTTRAF7TRRAPZFHX3
Askins Tumors
ERGEWSR1FLI1FUS
Chondrosarcomas
ACVR2ACDX1EWSR1FN1HEY1IRF2BP2NCOA2NR4A3 (NOR1)TAF15TCF12TFGALKARARID1ACDKN2A (P16INK4A)DNMT3AERBB3H3-3AHRASIDH1IDH2IRS4JAK1KMT2DMLLT3NRASPOLEPTENSMAD2 (MADH2)SMARCB1TERTZFHX3
Clear Cell Sarcomas
ATF1CREB1EWSR1FLI1NUTM2BYWHAEBRAFCDKN2A (P16INK4A)EGFR (ERBB1)NRASPTEN
Congenital (Infantile) Fibrosarcomas
ETV6METNTRK3TFG
Dermatofibrosarcoma Protuberans
COL1A1PDGFBFGFR1MED12
Dermatofibrosarcomas Protuberans
COL1A1PDGFB
Desmoplastic Small Round Cell Tumors
ERGEWSR1FLI1PATZ1WT1APCCICCREBBP (CBP)DAXXEGFR (ERBB1)
Endometrial Stromal Sarcomas
ALKBCORCXorf67EPC1FN1JAZF1MBTD1MEAF6NUTM2ANUTM2BPHF1SUZ12YWHAEZC3H7BASXL1CTNNB1ERBB3FBXW7FGFR2FLT3KRASMED12PIK3CA (p110-alpha)
Epithelioid Sarcomas
CREB3L1CREB3L2EWSR1FUSKLF17SS18SSX1DICER1SMARCB1
Ewing's Sarcomas
CICERGETV1ETV4EWSR1FEVFLI1FOXO4FUSNFATC2SMARCA5SP3ALKAPCARARID1AARID2ASXL1ATMBCORBRAFCBLCD209CD79BCDKN2A (P16INK4A)CICCREBBP (CBP)CTNNB1DAXXDGCR8DICER1DNMT3AEGFR (ERBB1)ERBB2 (HER-2, NEU)EZH2FBXW7FGFR1FGFR3FGFR4GNASHRASIDH1IDH2IRS4KIT (CD117)KMT2DKRASMED12METMLH1MLLT3MYOD1NCOR1NCOR2NOTCH2NRASPAX5PBRM1PIK3CA (p110-alpha)PIK3CBPIK3R1 (p85-ALPHA)PLCG1POLEPTENRECQL4SMARCB1TERTTNCTRAF7TRRAPZFHX3
Fibrosarcomas
BRAFCOL1A1CREB3L1CREB3L2EWSR1FUSLMNANTRK1PDGFBTOM1L2BCORCDKN2A (P16INK4A)CTNNB1EGFR (ERBB1)EZH2FGFR3FLT3KIT (CD117)KRASNRASPOLEPTENTERTTRAF7
Leiomyosarcomas
EWSR1HMGA2PBX3WT1ALKAPCARARID1AARID2ASXL1ATMCBLCREBBP (CBP)DAXXDNMT3AERBB3EZH2FGFR1FGFR3JAK1JAK3METMPLNCOR1PAX5RECQL4TRAF7
Liposarcomas
DDIT3 (GADD153, CHOP)EWSR1FUSHMGA2LGR5NUP107AKT1ALKAPCARID1AATMBRAFCBLCD79BCDKN2A (P16INK4A)CICCTNNB1DICER1DNMT3AEGFR (ERBB1)ERBB2 (HER-2, NEU)FBXW7FGFR1FGFR2FGFR3HRASJAK1JAK3KIT (CD117)KMT2DKRASMLH1MPLNCOR1NOTCH2PBRM1PDGFRAPIK3CA (p110-alpha)PIK3R1 (p85-ALPHA)POLEPTENRECQL4TERTZFHX3
Myofibroblastic Sarcomas
ALKLMNANTRK1RELAROS1SRFTFGTPM3YWHAE
Myxofibrosarcomas
CREB3L1CREB3L2FUS
Myxoid Chondrosarcomas
NR4A3 (NOR1)TAF15
Perivascular Epithelioid Cell Tumors (PEComa)
DVL2SFPQTFE3ALKATMCICJAK3MED12NOTCH2
Pleomorphic Sarcomas (Malignant Fibrous Histiocytoma)
CITED2MED12PRDM10ALKAPCARARID1AARID2ASXL1ATMBRAFCD79BCDKN2A (P16INK4A)CICCTNNB1DICER1DNMT3AEGFR (ERBB1)ERBB2 (HER-2, NEU)ERBB3EZH2FBXW7FGFR1FGFR4FLT3HRASIDH1JAK1JAK3KIT (CD117)KMT2DKRASMETMLH1MYOD1NCOR1NOTCH2NRASPAX5PBRM1PIK3CA (p110-alpha)POLEPTENPTPN11SMARCB1TERTTRAF7ZFHX3
Rhabdoid Tumors
NCOA4RETCREBBP (CBP)PBRM1SMARCB1
Rhabdomyosarcomas
CITED2EWSR1FLI1FOXO1NCOA1NCOA2PAX3PAX7SRFTEAD1VGLL2ALKAPCARARID1AARID2ASXL1ATMBCORBRAFCDKN2A (P16INK4A)CICCREBBP (CBP)CTNNB1DAXXDGCR8DICER1DNMT3AERBB2 (HER-2, NEU)ERBB3EZH2FBXW7FGFR1FGFR2FGFR3FGFR4FLT3GNASHRASIRS4KIT (CD117)KMT2DKRASMED12METMLH1MPLMYOD1NCOR2NOTCH2NRASPDGFRAPIK3CA (p110-alpha)POLEPTENPTPN11RECQL4SH2B3SMARCB1TNCTRAF7TRRAPWNK2ZFHX3
Small Round Cell Tumors
ERGETV1EWSR1FEVFLI1FOXO1PAX3
Solitary Fibrous Tumors
NAB2STAT6ALKAPCARID2CBLFBXW7FGFR1FGFR3KMT2DPIK3R1 (p85-ALPHA)PTENTERT
Synovial Sarcomas
COL6A3CSF1 (MCSF)S100A10SS18SS18L1SSX1SSX2SSX4BARID2BCORBRAFCTNNB1EGFR (ERBB1)FGFR1HRASKMT2DKRASMED12MLH1PDGFRAPIK3CA (p110-alpha)PIK3R1 (p85-ALPHA)PTENTERTTRAF7TRRAPZFHX3
Undifferentiated; Unclassified or Other Sarcomas
ATF1BCORCCNB3CREMERGETV4EWSR1FGF1FGFR1FLI1FN1FOXO1FUSGLI1JAZF1MAML3MKL2NPM1PAX3PLAG1POU5F1 (OCT4)RUNX1 (AML1)RUNX1T1SUZ12USP6ARID2ATMCICCREBBP (CBP)CTNNB1DICER1EGFR (ERBB1)FBXW7FLT3H3-3AMED12METNCOR1NOTCH2PBRM1SH2B3
Commercial Control Samples
ALKBAIAP2L1BRAFCCDC6CD74EGFR (ERBB1)EML4ERGETV6FGFR3KIF5BLMNAMETNCOA4NTRK1NTRK3PAX8PPARGRETROS1SEPT14SLC34A2SLC45A3TACC3TFGTMPRSS2TPM3
General Sarcoma Markers
CD248CD34EGFR (ERBB1)ERGMCAMPDGFRAPDGFRBPROM1S100A1SOX2TERTVIM
Sarcoma Type & Subtype Markers
Alveolar Soft Part Sarcomas​
INHBATFE3
Angiosarcomas & Epitheliod Haemangioendotheliomas​
CAMTA1DESERGFOSBMYCPECAM1TFE3
Chondrosarcomas​
AMACRFLI1SATB2VEGFA
Dermatofibrosarcoma Protuberans​
GRIA2
Desmoplastic Small Round Cell Tumors​
WT1
Endometrial Stromal Sarcomas​
ACTA2 (α-SMA)BCORDESEGFR (ERBB1)KIT (CD117)
Epitheliod Sarcomas​
CD109
Ewing's Sarcomas​
ALDH1A1 (RALDH1)ATP1A1BCL11BCCND1CD99FLI1GLG1NKX2-2PAX7RRM2SLFN11STEAP1VEGFA
Fibromyxoid Sarcomas​
ANO1MUC4
Follicular Dendritic Cell Sarcomas​
CLUCR2FCER2
Gastrointestinal Stromal Tumors (GIST)​
ACTA2 (α-SMA)ANO1CALCRLCD44COL22A1IGF1IGF1RIGF2KIT (CD117)MUC4PROM1SDHASDHB
Gonadal Stromal Tumors​
CD99INHBAWT1
Intimal Sarcomas​
CDK4MDM2PDGFRA
Leiomyosarcomas​
ACTA2 (α-SMA)ANO1DES
Liposarcomas​
CDK4DESMDM2
Malignant Peripheral Nerve Sheath Tumors (MPNST)​
ALKBCL2CDK4GFAPSMARCB1SOX10TLE1
Myofibroblastic Sarcomas​
ALKBCL2RB1
Myxofibrosarcomas​
AMACRASS1CDK4ITGA10MDM2MET
Osteosarcomas​
ALDH1A1 (RALDH1)CDK4FLI1LAMP3MDM2SATB2VEGFA
Rhabdoid Tumors​
ETV4SMARCB1
Rhabdomyosarcomas​
ACTA2 (α-SMA)ALDH1A1 (RALDH1)ALKCDK4DESIGFBP2MDM2MYOD1MYOGPAX7
Solitary Fibrous Tumors​
ALDH1A1 (RALDH1)GRIA2STAT6
Spindle Cell Sarcomas​
AFAP1L1
Synovial Sarcomas​
ANO1BCL2CDCA2EZH2FLI1INHBAKIF14MUC4PAX7TLE1
Undifferentiated; Unclassified or Other Sarcomas​
CCNB3SOX10WT1
Possible Prognostic Significance
Associated with Invasiveness​
CD44PROM1STEAP1TERT
Associated with Metastasis​
ACKR3CD9CDCA2CTAG1BCXCR4EZH2IGFBP7ITGA10KIF14
Chemotherapy Resistance​
ALDH1A1 (RALDH1)AMACRCEBPBPDGFRAPDGFRBSTEAP1
Clinical Outcome or Tumor Grade Indicators​
AFAP1L1AMACRCD109CD274 (PD-L1)CD274 (PD-L1)CD44CD9CDCA2CDK4CTAG1BCXCR4EZH2GPS2IGF1RIGFBP2KIF14MCAMMDM2STEAP1TERTVEGFA
Hypoxia & Oxidative Stress​
HIF1ASTEAP1VEGFA
Immunotherapy Response​
CD274 (PD-L1)CD274 (PD-L1)CTAG1B
Treatment Targets or Treatment Indicators​
IGF1RRRM2SLFN11
Cancer Stem Cell & Proliferation Markers
ALDH1A1 (RALDH1)CD44MKI67PDGFRAPDGFRB
Expression Affected by Genomic Variation
ALKATP1A1BCL11BBCORERGETV4FLI1GLG1NKX2-2SOX2WT1
Chordomas
ALKAPCARARID1AATMCBLCDKN2A (P16INK4A)CTNNB1KIT (CD117)KMT2DNRASPIK3CA (p110-alpha)PTENSMARCB1
Gastrointestinal Stromal Tumors (GIST)
ALKAPCARARID1AARID2ASXL1BRAFCBLCDKN2A (P16INK4A)CREBBP (CBP)DAXXDICER1EGFR (ERBB1)FBXW7FGFR1H3-3AJAK1KIT (CD117)KMT2DKRASMED12MYOD1NOTCH2PBRM1PDGFRAPIK3CA (p110-alpha)POLEPTENRECQL4SH2B3TERTTRAF7ZFHX3
Kaposi Sarcomas
BRAFPIK3CA (p110-alpha)
Malignant Peripheral Nerve Sheath Tumors (MPNST)
ARID2BCORBRAFCBLCDKN2A (P16INK4A)KRASNRASPAX5PDGFRATERT
Osteosarcomas
AKT1ALKAPCARARID1AASXL1BCORBRAFCBLCD209CDKN2A (P16INK4A)CREBBP (CBP)DAXXDNMT3AEGFR (ERBB1)FBXW7FGFR3FGFR4FLT3GNASH3-3AIDH2JAK1JAK3KMT2DMED12METMLH1MLLT3NCOR1NCOR2NOTCH2PBRM1PIK3CA (p110-alpha)PIK3CBPIK3R1 (p85-ALPHA)POLEPTENRECQL4SMAD2 (MADH2)TERTTNCTRRAPWNK2ZFHX3

Product Resources

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icon_0041_download-s Detailed Target List for each Analyte
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Resources

Brochures & Guides (2)
Massively Parallel Sequencing Solutions for Human Identity
PDF (2MB)

Next-generation sequencing using QIAGEN’s QIAseq – a powerful tool for human identification


The QIAseq advantage – interactive product profile
PDF (2MB)
State-of-the-art technologies to fast-track and streamline NGS workflows
Application Notes (2)
Noninvasive prenatal paternity testing by means of SNP-based targeted sequencing barcoded with Unique Molecular Indices
PDF (435KB)

The use of UMIs as part of a QIAseq targeted sequencing panel

QIAseq SPE technology for Illumina: Redefining amplicon sequencing
PDF (238KB)
Safety Data Sheets (2)
Safety Data Sheets
Download Safety Data Sheets for QIAGEN product components.
QIAseq 8-UDI Kit Set D (48)
Kit Handbooks (1)
QIAseq RNA Fusion XP Panel Handbook
PDF (3MB)
Template Files (1)
QIAseq RNA Fusion XP All-in-One Tool
SOFTWARE (884KB)
Certificates of Analysis (1)
Certificates of Analysis
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